Tools / Websites developed by this lab

• TICHR (https://github.com/wangjk321/Tichr/)

  A new bioinformatics tool for integrating epigenomes, 3D genomes and transcriptomes.

• CohesinDB (https://cohesindb.iqb.u-tokyo.ac.jp/)

  A comprehensive database for decoding cohesin-related epigenomes, 3D genomes and transcriptomes in human cells

• HiC1Dmetrics (https://h1d.readthedocs.io/)

  A comprehensive database for decoding cohesin-related epigenomes, 3D genomes and transcriptomes in human cells

• Churros (https://churros.readthedocs.io/en/latest/)

  A docker-based large-scale epigenome analysis pipeline